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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908488.1_cds_XP_016458610.1_52219
CDS Infomation

[gene=LOC107782257] [db_xref=GeneID:107782257] [protein=histone deacetylase HDT1-like] [protein_id=XP_016458610.1] [location=complement(join(12017..12071,12162..12291,12408..12489,12607..12705,12891..13051,13160..13207,13287..13303,13501..13712,13819..13889,14745..14757))] [gbkey=CDS]
Sequence

ATGGAGTTTTGGGGTGTTGAAGTGAAAGCAGGAGAATCTCTAAAGGTCAGGCCAGAGCTT
TATAAGCTCATTCATATTTCCCAGGCAGCTTTAGGTGAAGTGAAGGATGCCAAAGAAGCC
AAAAATGTTCCACTACGCGTCACTGTTGGAGAAAACAACTATGTCATTGGAACTCTATCA
GCTGAGGAAAGACCTCAATTGATGTTTGACTTGGTTTTTGAAAAGGAGTTTGAACTTTCA
CATGGCTGGAAAAATGGGAGTGTCTACTTCATTGGATACACAGCTGATGACCCAACTGAT
GAAATTGACTCAGAGGATGAAGATTCTGAGGATGAAGAGAGTGTTTTAGCTGCTCTAAAT
GGGAAACTTGAGGAGACAAAGGCTGATGTGAAGGATGTAAAGCCTGCGACAAAAGAGGCT
GCACCTACTAAGGCAAAAGCTACAGTAGCAGAACCAAAGAAAGAGGCGGAGTCTGATGAC
GATGATGATGAAGACGATAGTGACGAGGCAGAAGATGGCATGGATTCTGATGGTCCAGAA
GGAATGGATTTTTCTGACGATTCTGAGGATGATGATGATGATTCAGAGGAAGATGAGTCA
GAAGAAGAGACACCTAAAAAGTCTGCTCAGAACAAGAGACCTGCTCCACCTGCTAAGGCT
GGTTTTGCCAAAAAAGCAAAACAAGCTACACCCGACAAGTCAGGTGGTAAGAAAGGTCCG
GCAACACCTGCCTTCGCTAAGCAAAATGGTAAACCTGCAGCGGCCAATGGTAACAAGGGG
AAGGGTCAGAGCCCAAAATCTGGTGGCCAGTTCTCTGGCAAATCTCCCAACAAAAACTTC
AGTGGCCAACAAAAAGGTGGTTTCAAGGGCAAGCGTGGGAAGAAGTAG

Peptide Sequence

PEP ID

XP_016458610.1
PEP Infomation

PREDICTED: histone deacetylase HDT1-like [Nicotiana tabacum]
Sequence

MEFWGVEVKAGESLKVRPELYKLIHISQAALGEVKDAKEAKNVPLRVTVGENNYVIGTLS
AEERPQLMFDLVFEKEFELSHGWKNGSVYFIGYTADDPTDEIDSEDEDSEDEESVLAALN
GKLEETKADVKDVKPATKEAAPTKAKATVAEPKKEAESDDDDDEDDSDEAEDGMDSDGPE
GMDFSDDSEDDDDDSEEDESEEETPKKSAQNKRPAPPAKAGFAKKAKQATPDKSGGKKGP
ATPAFAKQNGKPAAANGNKGKGQSPKSGGQFSGKSPNKNFSGQQKGGFKGKRGKK

Transcript Sequence

Gene sequence data has not been registered.